It looks like you can configure them separately, but whatever you do to one, is automatically and simultaneously done to the other. I can’t figure out a way around this. I should mention this is for a Mac mini, so it’s the Standalone Magic Trackpad.
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There are multiple apps that can do this, this one is free and open source: https://pilotmoon.com/scrollreverser/
You are truly a god amongst mortals. May you find a very large amount of tax free money today.